All Publications

A full list of publications can be retrieved from one of the following sources:

 

Featured First/Corresponding-author Publications

Shain AH*, Joseph NM, Yu R, Benhamida J, Liu S, Prow T, Ruben B, North J, Pincus L, Yeh I, Judson R, Bastian BC*. Genomic and transcriptomic analysis reveal incremental disruption of key signaling pathways during melanoma evolution. In Revision.

Shain AH, Bastian BC. From melanocytes to melanomas. Nature Reviews Cancer. June 2016. Available Here.

Shain AH, Yeh I, Kovalyshyn I, Sriharan A, Talevich E, Gagnon A, Dummer R, North J, Pincus L, Ruben B, Rickaby W, D'Arrigo C, Robson A, Bastian BC. The genetic evolution of melanoma from precursor lesions. The New England Journal of Medicine. November 2015. Available Here.

Shain AH, Garrido M, Botton T, Talevich E, Yeh I, Sanborn JZ, Chung J, Wang NJ, Kakavand H, Mann GJ, Thompson JF, Wiesner T, Roy R, Olshen AB, Gagnon A, Gray JW, Huh N, Hur JS, Busam KJ, Scolyer RA, Cho RJ, Murali R, Bastian BC. Exome sequencing of desmoplastic melanoma identifies recurrent NFKBIE promoter mutations and diverse activating mutations in the MAPK pathway. Nature Genetics. October 2015. Available Here.

Shain AH, Pollack JR. The spectrum of SWI/SNF mutations, ubiquitous in human cancers. PLoS One. January 2013. Available Here.

  • Over 200 citations

Shain AH, Giacomini CP, Matsukuma K, Karikari CA, Bashyam MD, Hidalgo M, Maitra A, Pollack JR. Convergent structural alterations define SWItch/Sucrose NonFermentable (SWI/SNF) chromatin remodeler as a central tumor suppressive complex in pancreatic cancer. PNAS. January 2012. Available Here.

 

Featured collaborative studies

Chiba K, Lorbeer FK, Shain AH, McSwiggen DT, Schruf E, Oh A, Ryu J, Darzacq X, Bastian BC, Hockenmeyer D. Mutations in the promoter of telomerase gene TERT contribute to tumorigenesis by a two-step mechanism. Science. September 2017.

Yeh I, Lang UE, Durieux E, Tee MK, Jorapur A, Shain AH, Haddad V, Pissaloux D, Chen X, Cerroni L, Judson RL, LeBoit PE, McCalmont TH, Bastian BC, de la Fouchardiere A. Nature Communications. September 2017.

Yeh I, Botton T, Talevich E, Shain AH, Sparatta AJ, de la Fouchardiere A, Mully TW, North JP, Garrido MC, Gagnon A, Vemula SS, McCalmont TH, LeBoit PE, Bastian BC. Nature Communications. May 2015.

 

Funding

The Shain lab is grateful for the following sources of active funding: UCSF Department of Dermatology, National Cancer Institute (1 K22 CA217997-01), Melanoma Research Alliance, PhRMA Foundation, Melanoma Research Foundation

We also thank the following sources of former funding: Dermatology Foundation, UCSF Program in Breakthrough Biomedical Research, National Cancer Institute (5T32 CA177555-02), National Science Foundation Graduate Fellowship Research Program, Stanford Graduate Fellows program